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1 · Cell Structure

2. Foundations in Biology — Cambridge AS & A Level Biology 9700 Revision Notes & Topical Questions

20 min read 35 parts Lesson 1 of 13 Unit quiz

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Foundations in Biology — notes: Describe cell structure and microscopy, biological molecules, nucleic acids and protein synthesis, enzymes, membranes and transport, the cell cycle and cell differentiation, with the related practical skills.FeatureLightTEMSEMResolutionAbout 0.2 µ…

  • Magnification
  • Liquid specimen
  • Solid specimen
  • Stains for light microscopy
  • Stains for TEM
  • Limitations

Part 1 of 32Light and electron microscopes

FeatureLightTEMSEM
ResolutionAbout 0.2 µm (200 nm)About 0.2 to 0.5 nm3 to 10 nm
Useful magnificationUp to ×1500 to 2000Over ×500 000 to millionsLower than TEM
ImageColour, living or deadBlack and white, 2D, dead onlyBlack and white, 3D surface, dead only
ShowsWhole cells, nuclei, mitochondria, chloroplastsInternal structure of organelles (membranes, ribosomes, ER, lysosomes)Surface of objects (for example E. coli)
PracticalSmall, cheap, simple preparationLarge, expensive, complex preparation, vacuumLarge, expensive, vacuum
TEM
  • TEM electromagnets transmit electrons through the specimen; denser parts absorb more and appear darker.
SEM
  • SEM electrons scanned over the surface and the electrons that bounce back are detected.
Resolution
  • Resolution light is limited by wavelength (diffraction);
    • electrons have a smaller wavelength, so points much closer together can be separated.
Magnification
  • Magnification how many times larger the image is; for a light microscope, eyepiece × objective.

Part 2 of 32Preparing slides, stains and graticules

Preparing slides, stains and graticules
Liquid specimen
  • Liquid specimen drops with a pipette, coverslip lowered at an angle, gloves worn.
Solid specimen
  • Solid specimen cut a thin piece and stain;
    • or fix in formaldehyde, dehydrate with ethanol, impregnate with paraffin or resin, cut thin slices, remove paraffin, stain and mount;
    • or freeze in CO2 or liquid nitrogen, slice, stain.
Technique
  • Technique always start on low power;
    • a drop of water stops drying;
    • blurred image: go to low power, use coarse focus, check thickness and contamination.
Graticule
  • Graticule an eyepiece ruler with no units; calibrate each objective with a stage micrometer.
Stains for light microscopy
  • Stains for light microscopy dyes absorb some colours so structures become visible; differential staining uses several dyes; chloroplasts need no stain.
    • (toluidine blue gives blue, phloroglucinol red/pink)
Stains for TEM
  • Stains for TEM heavy-metal compounds absorb electrons; colour in electron micrographs is added by software.
    • (osmium tetroxide, ruthenium tetroxide)
Limitations
  • Limitations cell sizes differ with section plane, some structures cannot be seen, and preparation may alter structure.

Part 3 of 32Drawing cells and magnification calculations

Conventions
  • Conventions title and magnification, sharp HB pencil on plain paper, single clear lines, no shading, large and proportional, label lines ruled, not crossing, no arrowheads, on one side.
  • Cell drawings are at high power; plan drawings (low power) show tissue only, never individual cells.
Magnification
Magnification image size ÷ actual size.
  • Units
    • 1000 nm = 1 µm;
      • 1000 µm = 1 mm;
      • 1000 mm = 1 m;
      • 10 mm = 1 cm.
  • Convert to the same unit first50 mm image of a 2000 µm leaf section is 50 000 µm ÷ 2000 µm = ×25.
  • A 30 mm image at ×3000 is 0.01 mm = 10 µm.

Part 4 of 32Eukaryotic organelles

OrganelleStructure and function
Cell surface membranePartially permeable phospholipid bilayer (about 10 nm) controlling exchange
Cell wallOutside the membrane, freely permeable; cellulose in plants, peptidoglycan in bacteria; plasmodesmata link plant cells
NucleusDouble membrane with pores; chromatin (DNA and histones); nucleolus makes ribosomes
MitochondriaDouble membrane, inner membrane folded into cristae; matrix has enzymes, circular DNA and ribosomes; aerobic respiration and ATP
ChloroplastsDouble membrane; thylakoids stack into grana joined by lamellae; light-dependent stage in thylakoids, Calvin cycle in stroma; own DNA and ribosomes
RibosomesrRNA and protein, no membrane; 80S in eukaryotes, 70S in prokaryotes, mitochondria and chloroplasts; translation
Rough ERRibosomes on a membrane continuous with the nuclear envelope; processes proteins
Smooth ERNo ribosomes; makes, processes and stores lipids, carbohydrates, steroids
Golgi apparatusFlattened sacs; modify proteins and lipids and package them into vesicles
VacuolePlant: large permanent, tonoplast; animal: small and temporary
Vesicle and lysosomeVesicle: transport and storage; lysosome: hydrolytic enzymes digesting worn-out organelles and in the immune system and apoptosis
CentriolesMicrotubule hollow fibres in pairs forming a centrosome that organises the spindle; absent from flowering plants and fungi
Microtubules, microvilli, cilia and flagellaMicrotubules (25 nm, from α and β tubulin, 13 protofilaments) form the cytoskeleton; microvilli increase surface area; cilia move substances; flagella move the cell
Plant versus animal
  • Plant versus animal plants have cellulose walls, large vacuoles and chloroplasts;
    • animals have centrioles and microvilli.
Electron micrographs
Electron micrographs show more detail than photomicrographs because of higher resolution.

Part 5 of 32Protein production pathway and the cytoskeleton

1
DNA stored in the nucleus; the nucleolus makes ribosomes; transcription produces mRNA.
2
mRNA leaves and binds to a ribosome, where translation builds a polypeptide.
3
Rough ER folds and processes the polypeptide into protein.
4
Vesicles carry it to the Golgi apparatus, which modifies and packages it.
5
Vesicles fuse with the cell surface membrane and secrete the protein by exocytosis.
  • Cytoskeleton
    • microfilaments (actin, solid) and microtubules, plus intermediate filaments.
      • (tubulin, hollow)
    • Support and mechanical strength, holding organelles in place.
    • Tracks for moving vesicles and chromosomes using ATP.
    • Cell movement through cilia and flagella.

Part 6 of 32Prokaryotes versus eukaryotes

Prokaryote
  • 100 to 1000 times smaller;
    • no membrane-bound organelles;
    • 70S ribosomes;
    • circular DNA free in cytoplasm, not bound to protein;
    • cell wall of murein (a glycoprotein).
Extras
  • Extras plasmids, a slime capsule (protects from drying and immune attack) and flagella (rotate like propellers).
    • (small DNA loops, for example antibiotic resistance)
Exam note
  • Exam note size is not a structural difference; not all features are present in all prokaryotes.

Part 7 of 32Water and its properties

Water and its properties
Polar molecule
  • Polar molecule oxygen attracts electrons more strongly, giving a dipole; hydrogen bonds form between molecules.
    • (oxygen of one to hydrogen of another)
Solvent
  • Solvent polar substances and ions dissolve, so reactions happen and substances are transported.
High specific heat capacity
(4200 J kg-1 °C-1) — stable habitats and enzyme temperatures; blood plasma transfers heat.
High latent heat of vaporisation
  • High latent heat of vaporisation evaporation cools.
    • (sweat, transpiration)
Ice is less dense
  • Ice is less dense it floats and acts as a habitat.
Cohesion, adhesion and surface tension
  • Cohesion, adhesion and surface tension columns in xylem, pond skaters walk on water.
Reagent
  • Reagent water takes part in hydrolysis and is released in condensation.

Part 8 of 32Monomers, polymers, bonds and elements

Monomers, polymers, bonds and elements
Monomer, polymer, macromolecule
  • Monomer, polymer, macromolecule not all macromolecules are polymers; lipids are not polymers.
Condensation
Condensation joins monomers and removes water; hydrolysis adds water to break bonds.
Carbon
Carbon forms four stable covalent bonds in chains, branches and rings.
Elements
  • CarbohydratesC, H, O in the ratio Cx(H2O)y.
  • LipidsC, H, O with little oxygen.
  • ProteinsC, H, O, N and sometimes S.
  • Nucleic acidsC, H, O, N, P.
Functions
  • Carbohydratesenergy source and store, structure (cellulose).
  • Lipidsenergy source and store, insulation, membranes.
  • Proteinsgrowth and repair, structure, enzymes, hormones, antibodies, carriers.
  • Nucleic acidscarry the genetic code.

Part 9 of 32Carbohydrates

Monosaccharides
  • Monosaccharides trioses (3C), pentoses (5C, ribose) and hexoses (6C, glucose C6H12O6).
  • Glucose is soluble, the main respiratory substrate, with α and β isomers.
  • Reducing sugars (glucose, fructose, galactose) donate electrons (OILRIG); sucrose is non-reducing.
  • Deoxyribose lacks the oxygen on carbon 2 of ribose.
Glycosidic bond
  • Glycosidic bond condensation between two OH groups; broken by hydrolysis with different enzymes.
  • Maltose = glucose + glucose; sucrose = glucose + fructose; lactose = glucose + galactose.
Starch
  • Starch amylose and amylopectin (70 to 90%, 1,4 and 1,6 bonds, branched, many free ends); stored in plastids.
    • (10 to 30%, unbranched helix, compact and digestion-resistant)
Glycogen
  • Glycogen more branched than amylopectin;
    • animals and fungi;
    • granules in liver and muscle;
    • free ends allow quick release or storage.
Cellulose
  • β-glucose chains joined by hydrogen bonds into microfibrils; strong, freely permeable wall resisting turgor pressure; gives fibre.
    • (alternate units rotated 180°)
Storage polysaccharides
Storage polysaccharides are compact and insoluble, so there is no osmotic effect.

Part 10 of 32Lipids

Lipids
Triglyceride
  • Triglyceride glycerol + three fatty acids (RCOOH) joined by ester bonds in condensation; saturated or unsaturated (cis and trans).
    • (three waters released)
Functions
  • Energy store
    • 37 kJ per gram compared with 17 kJ for carbohydrate or protein;
      • hydrophobic so no osmotic effect;
      • releases metabolic water (desert animals, bird and reptile embryos).
  • Insulationmyelin sheath, adipose tissue, blubber.
  • Buoyancy and protection of organs.
Phospholipid
  • Phospholipid glycerol, two fatty acids and a phosphate; amphipathic,
    • forming bilayers; the hydrophobic core is a barrier and saturated tails make it less fluid.
Cholesterol
  • Cholesterol made in the liver, hydrophobic and hydrophilic regions;
    • disrupts close packing and stabilises at high temperature,
    • reducing permeability to ions; precursor of steroid hormones.
    • (keeps membranes fluid in the cold)

Part 11 of 32Proteins

Amino acids
  • 20 types with central carbon, amine group, carboxyl group, hydrogen and R group; peptide bond by condensation, broken by hydrolysis.
    • (C=O carbon to N)
Structure levels
  • Primarysequence of amino acids from DNA.
  • Secondaryα-helix or β-pleated sheet from hydrogen bonds in the backbone.
  • Tertiaryhydrogen, ionic, disulfide (strongest, cysteine, broken by oxidation or reduction) and hydrophobic interactions between R groups.
  • Quaternaryseveral polypeptides, for example haemoglobin.
Globular proteins
  • Globular proteins compact and soluble with hydrophobic R groups inward, hydrophilic outward;
    • enzymes, antibodies, insulin and haemoglobin.
  • Haemoglobin
    • two α and two β chains each with a haem group containing Fe2+;
      • four O2 per molecule;
      • sickle cell anaemia replaces glutamic acid with valine,
    • making it less soluble.
  • Insulinchains of 21 and 30 amino acids joined by three disulfide bridges.
Fibrous proteins
  • Fibrous proteins long, repetitive, insoluble and strong: keratin (hair, nails), elastin, collagen (triple helix, tendons, skin, bone).
    • (stretches and recoils)
  • Collagen strength comes from hydrogen bonds, staggered ends and stable proline and hydroxyproline.
SAFES
  • SAFES compare proteins by Shape, Amino acid sequence, Function, Examples and Solubility.

Part 12 of 32Inorganic ions

IonRole
H+Determines pH (normal body pH about 7.4); changes denature enzymes
Ca2+Regulates synapses, triggers muscle contraction (binds troponin), regulates channels, activates enzymes, clotting factor
Fe2+/Fe3+Binds oxygen in haemoglobin and myoglobin; electron transfer in cytochromes
Na+Co-transport of glucose and amino acids; nerve impulses
K+Repolarisation of axons, kidney water reabsorption, guard cells
NH4+Intermediate in deamination
NO3-Nitrogen for plant protein synthesis
HCO3-, Cl-Carbon dioxide transport and pH balance in blood
PO43-DNA, RNA, ATP and phospholipids
OH-Hydrogen bonding in DNA, proteins and water
  • Cofactors
    • some ions act as non-protein helpers for enzymes.

Part 13 of 32Biochemical tests and quantitative methods

Biochemical tests and quantitative methods
Benedict's test
  • Benedict's test excess reagent, heat;
    • blue → green → yellow → orange → brick-red;
    • for non-reducing sugars boil with HCl, neutralise with sodium hydrogencarbonate then test.
Iodine in potassium iodide
  • Iodine in potassium iodide blue-black for starch.
Emulsion test
  • Emulsion test ethanol then water; milky for lipid.
Biuret
  • Biuret sodium hydroxide then copper(II) sulfate;
    • blue to lilac/mauve;
    • needs at least two peptide bonds;
    • use a control.
Serial dilution
  • Serial dilution standards for comparison by eye, calibration curve or colorimeter;
    • also for counting microbes.
Colorimeter
  • Colorimeter filter of contrasting colour, zero with a blank, plot absorbance against known concentration and read unknowns.
    • (blue light for orange Benedict's)
Alternative
  • Alternative time to first colour change; shorter means higher concentration.

Part 14 of 32Chromatography

Principle
  • Principle solutes separate by solubility between the mobile phase (solvent) and stationary phase (paper);
    • larger or less soluble molecules move less.
Method
  • Method spot sample and standards on a pencil line, dry, suspend in solvent, mark the solvent front;
    • stain colourless sugars;
    • spray amino acids with ninhydrin (blue-violet).
Rf
Rf distance moved by solute ÷ distance moved by solvent; less than 1, no units.
  • Carotenoids near 1, chlorophyll a in the middle, chlorophyll b lower.
Use
  • Use after a positive biuret test, chromatography shows which amino acids are present, for example in forensics or food spoilage.

Part 15 of 32Nucleotides and DNA

Nucleotide
  • Nucleotide pentose sugar, phosphate and nitrogenous base.
  • DNA
    • deoxyribose, A, C, G, T;
      • RNA: ribose, A, C, G, U.
  • Purines (A, G) have two rings; pyrimidines (C, T, U) have one.
Phosphodiester bond
  • Phosphodiester bond condensation between phosphate and sugar, forming the sugar-phosphate backbone;
    • hydrolysed when polynucleotides break down.
ATP
  • ATP adenosine + three phosphates; ADP two, AMP one; universal energy currency.
    • (adenine is a base, adenosine a nucleoside)
DNA
  • DNA two antiparallel strands with bases inwards held by hydrogen bonds: A–T (two) and G–C (three).
    • (5' to 3' and 3' to 5')
  • If given the number of one base, work out the others (A = T, C = G).

Part 16 of 32DNA extraction (Marmur preparation)

1
Chop onion and add to detergent solution; heat at 60 °C for 15 minutes to disrupt membranes and denature DNA-digesting enzymes.
2
Cool in ice water for 5 minutes, stirring, so the DNA does not break down.
3
Blend for 5 seconds only, to release more DNA without breaking it.
4
Filter through coffee filter paper to remove debris.
5
Add protease to remove histone and other proteins.
6
Add ice-cold ethanol; DNA is insoluble and precipitates as a white layer.

Part 17 of 32DNA replication and the genetic code

1Semi-conservative replication
Semi-conservative replication in the S phase
  • DNA helicase breaks hydrogen bonds and unwinds the helix.
  • Activated nucleotides pair with exposed bases on each template strand.
  • DNA polymerase joins them by condensation, forming phosphodiester bonds.
  • Hydrogen bonds form between complementary bases.
2Importance
  • Importance one conserved strand ensures accuracy and genetic continuity;
    • copying errors give random spontaneous mutations.
3Genetic code
  • Genetic code a gene codes for a polypeptide; triplets code for amino acids.
    • (for example TAC = start/methionine)
  • 43 = 64 codons for 20 amino acids, so degenerate (limits mutation effects).
  • Non-overlapping and universal, so genetic engineering is possible.
4Codon and anticodon
  • Codon and anticodon mRNA triplets are codons; tRNA has complementary anticodons.

Part 18 of 32Transcription and translation

Transcription (nucleus)
  • Part of the DNA unwinds.
  • Free RNA nucleotides pair with the template strand.
  • RNA polymerase forms the mRNA backbone (phosphodiester bonds).
  • The mRNA leaves through a nuclear pore.
  • mRNA matches the coding strand (U for T);
    • RNA polymerase moves 3' to 5' along the template and mRNA grows 5' to 3'.
Translation (cytoplasm)
  • Translation (cytoplasm) mRNA attaches to the ribosome (rRNA aligns it).
  • tRNAs bring specific amino acids; two fit at a time.
  • The anticodon pairs with the codon.
  • A peptide bond forms between adjacent amino acids, catalysed by rRNA.
  • At a stop codon translation ends and the polypeptide is released.
Do not confuse
DNA polymerase (replication) with RNA polymerase (transcription).

Part 19 of 32Enzymes: structure and action

Enzymes: structure and action
Enzymes
Enzymes are globular protein catalysts that lower activation energy by destabilising bonds,
  • giving an alternative pathway; virtually every metabolic reaction needs one.
Location
  • Location intracellular (inside cells) or extracellular.
    • (such as digestive enzymes)
Specificity
  • Specificity the active site shape comes from the tertiary structure and is complementary to one substrate;
    • the enzyme-substrate complex is temporary.
Models
  • Lock and key (Fischer, 1890s): rigid shapes.
  • Induced fit (1959): the active site, and sometimes the substrate, change shape (conformational change) for the best fit.
Denaturation
  • Denaturation extremes of heat or pH change the active site; do not say enzymes are "killed".

Part 20 of 32Cofactors, coenzymes and practicals on enzymes

Cofactors
  • Cofactors non-protein helpers: inorganic ions, prosthetic groups (permanently bound; zinc in carbonic anhydrase) and coenzymes (organic, often from vitamins).
    • (chloride for amylase)
Coenzymes
Coenzymes carry electrons or groups between enzymes.
  • NAD, FAD (B vitamins) and NADP transfer hydrogen in respiration and photosynthesis.
  • ATP transfers phosphate groups; coenzyme A transfers acetyl groups.
Amylase and pH
  • Amylase and pH samples every 10 seconds into iodine until it stays orange-brown;
    • equal volumes and concentrations;
    • temperature controlled by a water bath;
    • a colorimeter is more objective.
Catalase
  • Catalase hydrogen peroxide → water + oxygen; measure oxygen volume in a set time.
Colorimetry for starch
  • Colorimetry for starch calibrate with weak iodine, use a red filter, make starch standards by serial dilution and plot a calibration graph.
    • (100% transmission)

Part 21 of 32Membrane structure (fluid mosaic model)

Membrane structure (fluid mosaic model)
Roles
  • Roles separate the cell from its environment, compartmentalise organelles, control exchange (diffusion, facilitated diffusion, osmosis, active transport) and act in cell signalling.
    • (lysosomal enzymes must be contained)
Fluid mosaic model (1972)
  • Fluid mosaic model (1972) fluid because phospholipids and proteins move;
    • mosaic because proteins are scattered.
Components
  • Phospholipid bilayer
    • barrier to water-soluble substances;
      • can act as signalling molecules.
  • Cholesterol
    • stops tight packing at low temperature and stabilises at high temperature;
      • adds strength.
  • Glycoproteins and glycolipidsreceptors (hormones, neurotransmitters), endocytosis, adhesion, and antigens such as ABO.
  • Channel and carrier proteinsspecific transport.
Cholesterol
Cholesterol can raise or lower fluidity depending on temperature, so read the stem.

Part 22 of 32Membrane permeability and the beetroot practical

Temperature
  • Temperature more fluidity makes the membrane less of a barrier;
    • around 40 °C many proteins denature, irreversibly disrupting the membrane. Solvents dissolve lipids.
Beetroot method
  • Beetroot method five equal cubes, rinsed, in 5 cm3 water at 10 to 50 °C for 30 minutes;
    • measure absorbance with a colorimeter.
  • Higher absorbance means more pigment, so higher permeability.
  • Freezing can damage channels and pierce the membrane.
  • Limitations
    • cuvette differences, uneven pieces and pigment distribution;
      • repeat and average.

Part 23 of 32Diffusion, facilitated diffusion and active transport

Diffusion, facilitated diffusion and active transport
Diffusion
  • Diffusion net movement down a concentration gradient from random kinetic energy;
    • rate depends on gradient, temperature, surface area, distance and molecule properties.
Facilitated diffusion
  • Facilitated diffusion channel proteins or carrier proteins (switch shape) for large polar molecules and ions.
    • (water-filled gated pores)
Active transport
  • Active transport against the gradient via specific carrier proteins changing shape using ATP;
    • examples are kidney reabsorption, digestion products, phloem loading and root hair ion uptake.
Endocytosis and exocytosis
  • Endocytosis and exocytosis bulk transport using energy.
  • Phagocytosis
    • bulk intake of solids (white blood cells engulfing bacteria);
      • pinocytosis: liquids.
  • Exocytosissecretory vesicles from the Golgi fuse with the membrane (pancreatic enzymes).
Naming
  • Naming state the specific term, not just "bulk transport".

Part 24 of 32Diffusion practicals

Visking tubing
  • Visking tubing a non-living partially permeable cellulose membrane;
    • starch and glucose inside;
    • test the surrounding water at intervals: glucose but not starch diffuses out.
  • Quantify with Benedict's and standards or a colorimeter.
Agar cubes
  • Agar cubes cubes (0.5, 1, 2 cm) with indicator in HCl;
    • rate = 1 ÷ time;
    • higher SA:V gives faster diffusion because volume (cubed) grows faster than surface area (squared).

Part 25 of 32Osmosis and water potential

Osmosis
  • Osmosis net movement of water from higher to lower water potential through a partially permeable membrane; pure water is 0 kPa and solutions are negative.
    • (more negative is lower)
  • Water can pass the bilayer because molecules are small.
Animal cells
  • Animal cells hypertonic: crenation; hypotonic: cytolysis; isotonic: no net change.
Plant cells
  • Plant cells water loss causes plasmolysis; water gain makes cells turgid, supporting the plant, while wilting is loss of turgor.
    • (protoplast pulls from the wall)
  • Animal cells do not plasmolyse.
  • In plasmolysis the external solution fills the space between wall and protoplast, since the wall is freely permeable.
Potato cylinders
  • Potato cylinders equal cylinders, blotted and weighed, in at least five sucrose solutions for about 30 minutes at 30 °C;
    • percentage change in mass.
  • Positive change
    • solution had higher water potential and cells are turgid;
      • negative: flaccid or plasmolysed;
      • zero: isotonic.
  • The x-intercept gives the potato's sucrose concentration.
Onion epidermis
  • Onion epidermis red onion strips in a series of solutions, count the percentage plasmolysed under a microscope.

Part 26 of 32The cell cycle and checkpoints

1Cell cycle
  • Cell cycle interphase (G1, S, G2), mitosis and cytokinesis;
    • cyclins trigger the transitions;
    • onion root tip about 20 hours, human intestine about 10 hours.
  • G1: growth, RNA, enzymes and proteins; signal to divide (peak mRNA synthesis).
  • S: DNA replication to two sister chromatids.
  • G2: growth, DNA checked, tubulin made for the spindle.
2Cytokinesis
  • Cytokinesis animal cells: constriction of cytoplasm; plant cells: a new wall forms.
3Checkpoints
  • G1: damage check before S phase.
  • S: all chromosomes replicated.
  • G2: second damage check.
  • Metaphasechromosomes correctly attached to spindle fibres.
4DNA molecules
  • 46 chromosomes become 92 chromatids after S phase.
    • (92 DNA molecules)

Part 27 of 32Stages of mitosis and its significance

StageEvents
ProphaseChromosomes condense (two sister chromatids at a centromere); centrosomes move to poles; spindle forms; nuclear envelope breaks down; nucleolus disappears
MetaphaseChromosomes line up on the equator, spindle fibres attached to centromeres via kinetochores
AnaphaseCentromeres divide; spindle fibres shorten; chromatids pulled to opposite poles
TelophaseChromosomes decondense; nuclear envelopes and nucleoli reform; spindle breaks down
1
Root tip practical
  • Root tip practical onion or garlic root tips (about 1 cm), stain with warm acidified acetic orcein, squash gently, draw and annotate.
  • Prophase and telophase are hard to tell apart; several nuclei in a cell indicate telophase.
2
Significance
  • Significance growth, replacement and repair, and asexual reproduction (Amoeba, Hydra and yeast budding, strawberry runners).
    • (skin, gut; regeneration in zebrafish fins and axolotl limbs)

Part 28 of 32Meiosis and its significance

Meiosis I
  • Prophase I
    • homologous pairs form bivalents;
      • non-sister chromatids cross over at chiasmata.
  • Metaphase Ibivalents line up with independent assortment.
  • Anaphase I
    • whole chromosomes separate;
      • centromeres intact.
  • Telophase I and cytokinesistwo haploid cells (cell plate and middle lamella in plants).
Meiosis II
  • Meiosis II no DNA replication; prophase II, metaphase II (single file), anaphase II (centromeres divide) and telophase II give four haploid cells.
    • (new spindle at right angles)
Variation
  • Crossing overswapping of alleles between non-sister chromatids, more likely away from the centromere.
  • Independent assortment2n combinations (223 = 8 388 608 in humans).
  • Random fertilisation, plus mutation.
Counting
  • Counting chromosomes are counted by centromeres, not chromatids.

Part 29 of 32Specialised animal cells

CellAdaptations
ErythrocyteBiconcave disc, haemoglobin, no nucleus, flexible membrane for capillaries
NeutrophilFlexible shape and lobed nucleus; pseudopodia; many lysosomes; phagocytosis
SpermHaploid nucleus, acrosome enzymes, mitochondria in mid-piece, rotating tail
Ciliated epitheliumCilia beat to move mucus; goblet cells secrete mucus trapping dust and microbes
Squamous epitheliumSingle flattened cells on a basement membrane; short diffusion path; permeable to gases
Muscle (skeletal, smooth, cardiac)Protein filaments slide; many mitochondria; skeletal fibres fuse and are multinucleate
CartilageStrong flexible tissue, for example C-shaped tracheal rings keeping the airway open

Part 30 of 32Specialised plant cells and organisation

CellAdaptations
Root hair cellExtension for surface area, thin wall, concentrated vacuole sap, mitochondria for active transport, no chloroplasts
Palisade cellMany chloroplasts; tall thin shape lets light penetrate deeper and packs densely
Guard cellInner wall thicker than outer; bends when turgid; many chloroplasts and mitochondria
Xylem vesselNo end walls, dead, lignin thickening
PhloemLiving sieve tube elements with sieve plates and companion cells; few organelles
  • Levels of organisation
    • specialised cells form tissues, tissues form organs and organs form organ systems.
    • Examples
      • red blood cell to blood;
        • heart (cardiac muscle, vessels, connective tissue) to circulatory system.

Part 31 of 32Stem cells and their uses

Stem cell
  • Stem cell divides indefinitely;
    • daughter cells can remain stem cells or differentiate;
    • potency is the ability to differentiate.
  • Totipotentany embryonic and extra-embryonic cell (zygote and cells up to 16-cell stage).
  • Pluripotentany cell in the embryo but not the placenta.
  • Multipotentlimited range in one tissue (adult stem cells).
Bone marrow stem cells
Bone marrow stem cells form erythrocytes (lose nucleus, biconcave, more haemoglobin, flexible membrane) and neutrophils (lobed nucleus, more hydrolytic enzymes and lysosomes).
Plant meristems
  • Plant meristems cambium forms xylem and phloem sieve tubes (less cytoplasm, fewer organelles, sieve plates).
    • (lignin, loss of cytoplasm and end walls)
Medical uses
  • Medical uses repair tissue, treat Alzheimer's and Parkinson's, and study development and drug effects on embryos.
    • (skin for burns, neurones for spinal cord, pancreas cells for type 1 diabetes, retina cells)
Evaluation
  • Evaluation ethical concerns over embryos that could become humans, immune rejection unless tissue-matched,
    • and uncontrolled division leading to cancer.

Part 32 of 32Worked examples

  1. Calculate the magnification of a drawing 60 mm long of a cell measured as 40 µm. [2]2 marks

  2. Explain why a non-competitive inhibitor lowers Vmax but a competitive inhibitor does not. [3]3 marks

  3. Describe the structure of a DNA molecule. [4]4 marks

  4. A tissue cylinder gains 12% in mass in a solution. Explain what this shows. [3]3 marks

  5. Explain how crossing over and independent assortment cause variation. [4]4 marks

Key terms

TermMeaning
ResolutionThe ability to distinguish two points as separate.
Glycosidic bondA covalent bond between monosaccharides formed by condensation.
Peptide bondA covalent bond between amino acids formed by condensation.
Phosphodiester bondThe bond linking nucleotides in the backbone.
Induced fitModel in which the active site changes shape to bind the substrate.
CofactorA non-protein substance an enzyme needs to function.
Water potentialThe tendency of water to move out of a solution; pure water is 0 kPa.
PotencyThe ability of a stem cell to differentiate into other cell types.
ChiasmaThe point where non-sister chromatids cross over in meiosis I.

Avoid these mistakes

1
Saying DNA polymerase forms hydrogen bonds — it forms phosphodiester bonds.
2
Saying enzymes are killed — they are denatured.
3
Saying animal cells plasmolyse — only plant cells do.
4
Confusing chromosomes with chromatids when counting.
5
Using size as a structural difference between prokaryotes and eukaryotes.

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