3.4Topic 3 · Voice of the Genome
Differentiation and Variation — Edexcel A Level Biology A (SNAB) 9BI0 Revision Notes & Topical Questions
15 min read 22 parts Lesson 19 of 26 1 quiz
Stem Cells, Differentiation and Gene Expression — EDEXCEL A LEVEL BIOLOGY A (SNAB) 9BI0 — REVISION NOTES notes: Describe types of stem cell, their uses and ethical issues, and explain differentiation as differential gene expression.A stem cell is an undifferentiated cell that can…
- Totipotent
- Pluripotent
- Multipotent
- Worked example 1
- Worked example 2
- Worked example 3
Section 1 of 22What stem cells are
A stem cell is an undifferentiated cell that can divide by mitosis an unlimited number of times.
Adult stem cells are found in tissues such as bone marrow (used to produce blood cell types) and the brain (neural and glial cells). Small numbers of these remain to produce cells for growth, cell replacement and tissue repair.
Section 2 of 22Stem cells in medicine
Because stem cells can differentiate, they are very valuable in research and treatment, as they can replace damaged tissues and cells.
- including replacing damaged nerve tissue to treat spinal cord injuries,
- and replacing damaged heart tissue after heart attacks.
Section 3 of 22Evaluating the use of stem cells
The use of stem cells collected from embryos created by IVF is ethically questionable, because it destroys a viable embryo (one that could become a foetus if implanted in a uterus).
- but unlike embryonic stem cells they cannot differentiate into all the specialised cell types, some of which may be needed to treat certain diseases.
Section 4 of 22Differentiation: differential gene expression
Stem cells become specialised through differential gene expression: only certain genes in the DNA of the stem cell are activated and expressed.
- but different cells express different genes.
Section 5 of 22Worked examples
Explain why adult stem cells are less useful than embryonic stem cells in treatment. [2]2 marks
Adult stem cells are multipotent, so can only differentiate into a limited number of cell types, whereas embryonic stem cells are pluripotent.
Explain how two cells with the same genome can have different structures. [3]3 marks
Different genes are expressed in each cell (differential gene expression), so different mRNA and proteins are made, giving different structures and functions.
Give one ethical objection to the use of embryonic stem cells. [1]1 mark
It involves destroying embryos that could have developed into a foetus.
Section 6 of 22Transcription factors in eukaryotes
Differential gene expression is controlled in eukaryotes by transcription factors: proteins that control the transcription of genes by binding to a specific region of DNA, usually near the gene's promoter.
Section 7 of 22Operons in prokaryotes
In prokaryotes gene expression is often controlled using operons.
The lac operon controls the use of lactose. The components in order are the regulatory gene (coding for the repressor protein), the promoter, the operator, and the structural genes lacZ (coding for lactase, beta-galactosidase), lacY (coding for lactose permease, which moves lactose into the cell) and lacA.
- RNA polymerase can bind to the promoter and transcribe the structural genes, and lactase and permease are made so that lactose can be used.
- When the lactose is used up, the repressor binds again and transcription stops.
Section 8 of 22Environmental influence and epigenetics
An organism's internal or external environment can influence gene expression. The levels of regulatory proteins or transcription factors can change in response to stimuli such as light, and to chemicals including drugs and hormones. For example, enzymes are activated by ultraviolet radiation and increase expression of melanin-producing genes, so more melanin is made and the skin becomes pigmented (tanning).
Epigenetics is the study of heritable changes in gene function that do not involve changes in the DNA base sequence.
- which inactivates genes by preventing transcription factors and RNA polymerase from binding.
Section 9 of 22Worked examples
Describe how a transcription factor controls gene expression. [3]3 marks
It binds to a specific region of DNA; an activator promotes binding of RNA polymerase and so stimulates transcription, while a repressor prevents transcription.
Explain what happens to the lac operon when lactose is absent. [3]3 marks
The repressor binds to the operator, blocking RNA polymerase, so the structural genes are not transcribed and no lactase is made.
Explain the benefit of the lac operon to bacteria. [2]2 marks
Lactase is only made when lactose is available, so energy and amino acids are not wasted.
Section 10 of 22Histone modification
The amino acid lysine has a positively charged R group, which forms ionic bonds with the negatively charged phosphate backbone of DNA.
- making the DNA less tightly wrapped.
- which attracts DNA more strongly, inhibits transcription and again stops the gene being expressed.
Section 11 of 22Epigenetic inheritance and mutation
Evidence shows that modifications to the epigenome in one generation can be passed on to the next generation at the cellular or whole-organism level.
- but mutations change the genetic code itself by altering the nucleotide sequence,
- whereas epigenetic changes affect only the way the code is read.
Section 12 of 22Phenotypes and variation
The observable characteristics of an organism are its phenotype, and phenotypic variation is the difference in phenotypes between organisms of the same species.
Section 13 of 22Environmental causes of variation
The environment can also affect the phenotype.
- which occurs because synthesis of chlorophyll slows or stops.
- (magnesium is a component of chlorophyll)
Exam questions may ask why variation due to genetics is inherited but variation due to the environment is not. Genetic variation directly affects the DNA of the gametes; variation caused by the environment does not.
Section 14 of 22Applying the ideas to exam data
When data show identical twins who become different over time, such as differing disease risk, epigenetic changes (methylation and histone modification) caused by different environments are a good explanation, because their DNA sequences are identical. When the question gives plants of the same genotype grown under different conditions, any difference in phenotype is environmental; when plants of different genotypes are grown in the same conditions, differences are genetic.
Section 15 of 22Worked examples
Explain how acetylation of histones increases gene expression. [4]4 marks
Acetylation removes the positive charge from lysine, so histones bind DNA less strongly and the DNA unwinds; transcription factors and RNA polymerase can bind and the gene is transcribed.
State one difference between a mutation and an epigenetic change. [1]1 mark
A mutation changes the DNA base sequence; an epigenetic change alters expression without changing the sequence.
Explain why plants grown in the dark are yellow. [2]2 marks
Chlorophyll synthesis is slowed or stops in the dark, so the leaves lack green pigment (chlorosis).
Section 16 of 22Qualitative and quantitative variation
Variation in the phenotypes of organisms can be due to qualitative or quantitative differences. Discontinuous variation involves qualitative differences: individuals fall into distinct categories with no intermediates, for example human blood groups (A, B, AB, O).
Section 17 of 22Polygenic inheritance
Some phenotypes are affected by many genes (polygenic inheritance), each with multiple alleles at different loci, as well as by the environment. This often gives rise to continuous variation, because the many combinations of alleles give many different phenotypes.
Where the alleles are additive, each dominant (or contributing) allele adds the same amount to the phenotype.
- so the phenotype is x + x + x + x = 4x cm; the genotype h h t t has none and gives the smallest value.
Be careful
- it is not a given that each gene has the same effect on the phenotype as in the example.
- Check the information in the question.
Section 18 of 22Comparison
| Feature | Discontinuous | Continuous |
|---|---|---|
| Type of difference | Qualitative, distinct categories | Quantitative, a range |
| Genes | One or few genes | Many genes (polygenic) plus environment |
| Example | Blood group | Height |
| Graph | Bar chart | Histogram / bell curve |
Section 19 of 22Describing and explaining distributions
Continuous data in a sample of a population usually give a normal distribution: a symmetrical bell-shaped curve in which most individuals are near the mean and few are at the extremes.
- so that many intermediate phenotypes arise.
Example of an additive model with three genes: if each upper-case allele adds 2 cm, the genotype AABBCC adds 12 cm, AaBbCc adds 6 cm and aabbcc adds 0 cm, so there are seven phenotype classes, which form a bell-shaped distribution when plotted.
Section 20 of 22Worked examples
Explain why human height shows continuous variation. [3]3 marks
Height is controlled by many genes (polygenic inheritance) with additive effects, and is also affected by the environment (e.g. diet), producing a range of values rather than categories.
Two genes each have alleles that add 3 cm. What is the phenotypic contribution of the genotype AaBb? [2]2 marks
It contains two contributing alleles: 2 x 3 = 6 cm.
Name the type of variation shown by blood groups. [1]1 mark
Discontinuous variation.
Section 21 of 22Key terms
| Term | Meaning |
|---|---|
| Stem cell | Undifferentiated cell that divides repeatedly and can differentiate. |
| Totipotent | Able to become any cell type including extra-embryonic. |
| Pluripotent | Able to become almost any body cell type. |
| Multipotent | Able to become a limited range of cell types. |
| Differentiation | Process by which a cell becomes specialised. |
| Differential gene expression | Activation of only some genes in a cell. |
| Term | Meaning |
|---|---|
| Transcription factor | Protein that binds to DNA to control transcription. |
| Operon | Group of genes under a single promoter and operator in prokaryotes. |
| Repressor | Protein that prevents transcription. |
| Operator | DNA region to which a repressor binds. |
| Epigenetics | Heritable changes in gene expression without a change in DNA sequence. |
| DNA methylation | Addition of methyl groups to DNA that inactivates genes. |
| Term | Meaning |
|---|---|
| Histone | Protein around which DNA is wound. |
| Acetylation | Addition of acetyl groups to histones, increasing expression. |
| Chlorosis | Yellowing of plants due to lack of chlorophyll. |
| Phenotypic variation | Differences in observable characteristics within a species. |
| Term | Meaning |
|---|---|
| Continuous variation | Range of phenotype values with no distinct categories. |
| Discontinuous variation | Distinct phenotype categories. |
| Polygenic | Controlled by many genes. |
| Additive effect | Each contributing allele adds to the phenotype. |
Section 22 of 22Exam technique
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