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6.2.46 · Nucleic Acids and Protein Synthesis

Transcription — Cambridge AS & A Level Biology 9700 Revision Notes & Topical Questions

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6.2.4 Transcription — CAMBRIDGE AS & A LEVEL BIOLOGY 9700 — REVISION NOTES notes: Describe how RNA polymerase makes mRNA from a DNA template, and distinguish the template strand from the coding strand.

  • DNA stays in the nucleus
  • Many copies
  • One strand copied
  • Template (antisense) strand
  • Coding (sense) strand
  • Codons and anticodons

Section 1 of 9Why transcription is needed

DNA stays in the nucleus
  • DNA stays in the nucleus it is too valuable to leave the nucleus and too large to pass through nuclear pores.
mRNA copy
  • mRNA copy transcription makes a short, disposable, single-stranded copy of one gene, and a single-stranded molecule can fit through nuclear pores.
Many copies
  • Many copies many mRNA copies can be made from one gene, so much protein can be produced.
Control
  • Control the amount of transcription can be regulated, so genes are switched on or off.

Section 2 of 9Template and coding strands

1One strand copied
  • One strand copied only one of the two DNA strands in a gene is transcribed.
2Template (antisense) strand
  • Template (antisense) strand the strand used as the template, also called the transcribed strand.
3Coding (sense) strand
  • Coding (sense) strand the non-transcribed strand, which has the same base sequence as the mRNA with T in place of U.
4Codons and anticodons
  • Codons and anticodons mRNA codons match the non-template strand and tRNA anticodons match the template strand, with U replacing T.

Section 3 of 9Steps of transcription

1
RNA polymerase binds to the DNA at the start of the gene, the promoter region.
2
Hydrogen bonds between base pairs break and the strands separate, exposing the template strand bases; only about ten to twenty base pairs are open at a time.
3
Free RNA nucleotides (triphosphates) pair with the exposed template bases: A with U, T with A, G with C, C with G.
4
RNA polymerase joins adjacent RNA nucleotides by phosphodiester bonds, forming the sugar–phosphate backbone of the mRNA in the 5′ to 3′ direction.
5
As the polymerase moves on, the DNA behind it re-forms its double helix and the mRNA peels away.
6
At a terminator sequence the polymerase and finished mRNA are released.
7
The mRNA leaves the nucleus through a nuclear pore.

Section 4 of 9Processing in eukaryotes

1Pre-mRNA
  • Pre-mRNA the first RNA product contains exons (coding) and introns (non-coding), so it is also called the primary transcript.
2Splicing
  • Splicing introns are removed and exons are joined to form mature mRNA, a process of post-transcriptional modification.
3Prokaryotes
  • Prokaryotes their genes have no introns, so mRNA is used directly.

Section 5 of 9Control of transcription

Transcription factors
  • Transcription factors in eukaryotes, these proteins bind the promoter before RNA polymerase can attach.
Hormone example
  • Hormone example oestrogen enters a cell, binds a receptor, and the complex acts as a transcription factor that switches on specific genes.
Meaning
  • Meaning a signal outside the cell changes which proteins are made by changing transcription factor or polymerase activity, not the DNA sequence.
Data
  • Data more mRNA of a gene in a tissue means the gene is transcribed more actively there.
  • Pancreas cells have much insulin mRNA but muscle cells almost none, though both have the gene,
    • so differentiated cells express only part of their genome.

Section 6 of 9Replication and transcription compared

FeatureDNA replicationTranscription
EnzymeDNA polymeraseRNA polymerase
Region copiedWhole genomeOne gene
Strands usedBothOne (template)
ProductTwo DNA moleculesOne mRNA molecule
PrimerNeededNot needed
Proof-readingGoodLess, but errors matter little as mRNA is short-lived and many copies are made

Section 7 of 9More from the specification

More from the specification
Transcription in Protein Synthesis
  • Transcription occurs in the eukaryotic nucleus where RNA polymerase synthesizes a single-stranded messenger RNA (mRNA) from the template DNA strand;
    • base triplets on mRNA called codons code for specific amino acids.
Translation and Polypeptide Assembly
  • In the second stage of protein synthesis, translation occurs in the cytoplasm where ribosomes and transfer RNA (tRNA) read mRNA codons in sequence to join amino acids with peptide bonds into a functioning polypeptide chain.
Gene Mutations and Protein Function
  • A gene mutation involving nucleotide base substitution, insertion,
  • or deletion changes the triplet code;
    • such mutations can alter the sequence of amino acids in the primary structure, changing tertiary folding and disrupting the normal biological function of the protein.
Transcription in Protein Synthesis
  • Transcription occurs in the eukaryotic nucleus where RNA polymerase synthesizes a single-stranded messenger RNA (mRNA) from the template DNA strand;
    • base triplets on mRNA called codons code for specific amino acids.
Translation and Polypeptide Assembly
  • In the second stage of protein synthesis, translation occurs in the cytoplasm where ribosomes and transfer RNA (tRNA) read mRNA codons in sequence to join amino acids with peptide bonds into a functioning polypeptide chain.
Gene Mutations and Protein Function
  • A gene mutation involving nucleotide base substitution, insertion,
  • or deletion changes the triplet code;
    • such mutations can alter the sequence of amino acids in the primary structure, changing tertiary folding and disrupting the normal biological function of the protein.
Protein synthesis
  • Making proteins from amino acids using the DNA code.
Polypeptide
  • A chain of three or more amino acids.
Mutation
  • A random change in genetic material.
Translation
  • Using the mRNA code to build a protein.
Triplet
  • Three consecutive DNA bases that code for one amino acid.
Insertion
  • Addition of one or more nucleotides into a DNA sequence.
Complementary
  • Having a matching shape.
Universal
  • Describes a code that is the same in nearly all organisms.
Amino acid
  • The unit from which proteins are made; the sequence decides the protein's shape and function.

Section 8 of 9Key terms

TermMeaning
RNA polymeraseThe enzyme that joins RNA nucleotides to make mRNA during transcription.
Template strandThe DNA strand that is copied during transcription.
Coding strandThe DNA strand with the same base sequence as the mRNA (T for U).
Pre-mRNAThe initial RNA transcript in eukaryotes, containing introns and exons.
ExonA coding region of a gene that is kept in mature mRNA.
IntronA non-coding region removed from pre-mRNA by splicing.
PromoterA DNA sequence at the start of a gene where RNA polymerase binds.

Section 9 of 9Exam technique

1
Saying RNA polymerase uses both DNA strands — only the template strand is copied for a given gene.
2
Saying thymine pairs with adenine in mRNA — uracil pairs with adenine on the template.
3
Confusing RNA polymerase with DNA polymerase.
4
Thinking the whole DNA molecule is transcribed — only individual genes are.
5
Writing that introns are translated — they are removed from pre-mRNA first.

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